HL_5AN9_004

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

5AN9|1|N|A|1480

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03271.1

Basepair signature

cWW-R-R-R-tSH-R-R

Number of instances in this motif group

10

Unit IDs

5AN9|1|N|C|1474
5AN9|1|N|A|1475
5AN9|1|N|U|1476
5AN9|1|N|G|1477
5AN9|1|N|G|1478
5AN9|1|N|A|1479
5AN9|1|N|A|1480
5AN9|1|N|G|1481
5AN9|1|N|U|1482
5AN9|1|N|C|1483
5AN9|1|N|G|1484

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain D

60S RIBOSOMAL PROTEIN L12

Chain J

RIBOSOME MATURATION PROTEIN SBDS