HL_5AN9_005

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72935.1

Basepair signature

cWW-tSH-R-R-R-R

Number of instances in this motif group

42

Unit IDs

5AN9|1|N|U|1502
5AN9|1|N|G|1503
5AN9|1|N|U|1504
5AN9|1|N|A|1505
5AN9|1|N|A|1506
5AN9|1|N|C|1507
5AN9|1|N|A|1508
5AN9|1|N|A|1509

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain D

60S RIBOSOMAL PROTEIN L12

Chain H

UBIQUITIN-60S RIBOSOMAL PROTEIN L40

Chain J

RIBOSOME MATURATION PROTEIN SBDS