HL_5AN9_028

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5AN9_028 not in the Motif Atlas

Homologous match to HL_8P9A_167

Geometric discrepancy: 0.2989

The information below is about HL_8P9A_167

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5AN9|1|N|A|3006
5AN9|1|N|A|3007
5AN9|1|N|C|3008
5AN9|1|N|A|3009
5AN9|1|N|G|3010
5AN9|1|N|A|3011
5AN9|1|N|A|3012
5AN9|1|N|A|3013
5AN9|1|N|U|3014

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains