HL_5AOX_001
3D structure
- PDB id
- 5AOX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human Alu RNA retrotransposition complex in the ribosome-stalling conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.04 Å
Loop
- Sequence
- GGUGGCUC
- Length
- 8 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
5AOX|1|C|G|11
5AOX|1|C|G|12
5AOX|1|C|U|13
5AOX|1|C|G|14
5AOX|1|C|G|15
5AOX|1|C|C|16
5AOX|1|C|U|17
5AOX|1|C|C|18
Current chains
- Chain C
- ALU JO CONSENSUS RNA
Nearby chains
No other chains within 10ÅColoring options: