HL_5AXM_004
3D structure
- PDB id
- 5AXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.21 Å
Loop
- Sequence
- CAGUUGGGAG
- Length
- 10 nucleotides
- Bulged bases
- 5AXM|1|P|U|16||||2_555, 5AXM|1|P|U|17||||2_555, 5AXM|1|P|G|18||||2_555
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61092.1
- Basepair signature
- cWW-cWS-R-R-R
- Number of instances in this motif group
- 8
Unit IDs
5AXM|1|P|C|13||||2_555
5AXM|1|P|A|14||||2_555
5AXM|1|P|G|15||||2_555
5AXM|1|P|U|16||||2_555
5AXM|1|P|U|17||||2_555
5AXM|1|P|G|18||||2_555
5AXM|1|P|G|19||||2_555
5AXM|1|P|G|20||||2_555
5AXM|1|P|A|21||||2_555
5AXM|1|P|G|22||||2_555
Current chains
- Chain P
- RNA (75-MER)
Nearby chains
- Chain B
- tRNA(His)-5'-guanylyltransferase (Thg1) like protein
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