HL_5CZP_116

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

5CZP|1|XA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5CZP_116 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.0785

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

5CZP|1|XA|C|342
5CZP|1|XA|U|343
5CZP|1|XA|A|344
5CZP|1|XA|C|345
5CZP|1|XA|G|346
5CZP|1|XA|G|347

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19