HL_5CZP_221
3D structure
- PDB id
- 5CZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGUUCAAAUCCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5CZP_221 not in the Motif Atlas
- Homologous match to HL_5EL4_250
- Geometric discrepancy: 0.3726
- The information below is about HL_5EL4_250
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25222.2
- Basepair signature
- cWW-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
5CZP|1|XV|C|51
5CZP|1|XV|G|52
5CZP|1|XV|G|53
5CZP|1|XV|U|54
5CZP|1|XV|U|55
5CZP|1|XV|C|56
5CZP|1|XV|A|57
5CZP|1|XV|A|58
5CZP|1|XV|A|59
5CZP|1|XV|U|60
5CZP|1|XV|C|61
5CZP|1|XV|C|62
5CZP|1|XV|G|63
Current chains
- Chain XV
- P-site tRNA fMet
Nearby chains
- Chain Y0
- 50S ribosomal protein L27
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YG
- 50S ribosomal protein L5
- Chain YQ
- 50S ribosomal protein L16
- Chain YZ
- 50S ribosomal protein L25
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