HL_5DCV_002
3D structure
- PDB id
- 5DCV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of PhoRpp38-SL12M complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
5DCV|1|D|G|26
5DCV|1|D|G|27
5DCV|1|D|A|28
5DCV|1|D|A|29
5DCV|1|D|A|30
5DCV|1|D|C|31
Current chains
- Chain D
- RNA (47-MER)
Nearby chains
- Chain B
- RNA (47-MER)
- Chain C
- 50S ribosomal protein L7Ae
Coloring options: