HL_5DGE_150
3D structure
- PDB id
- 5DGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GUUAUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 5DGE|1|5|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5DGE_150 not in the Motif Atlas
- Homologous match to HL_5TBW_037
- Geometric discrepancy: 0.0892
- The information below is about HL_5TBW_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5DGE|1|5|G|1680
5DGE|1|5|U|1681
5DGE|1|5|U|1682
5DGE|1|5|A|1683
5DGE|1|5|U|1684
5DGE|1|5|C|1685
5DGE|1|5|U|1686
5DGE|1|5|U|1687
5DGE|1|5|U|1688
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m9
- 60S ribosomal protein L19-A
- Chain n2
- 60S ribosomal protein L22-A
Coloring options: