HL_5DOX_215
3D structure
- PDB id
- 5DOX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with Hygromycin-A at 3.1A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUUUGC
- Length
- 7 nucleotides
- Bulged bases
- 5DOX|1|1a|U|202, 5DOX|1|1a|U|204
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5DOX_215 not in the Motif Atlas
- Homologous match to HL_6CZR_076
- Geometric discrepancy: 0.2823
- The information below is about HL_6CZR_076
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34168.3
- Basepair signature
- cWW-cWW-F
- Number of instances in this motif group
- 11
Unit IDs
5DOX|1|1a|G|200
5DOX|1|1a|C|201
5DOX|1|1a|U|202
5DOX|1|1a|U|203
5DOX|1|1a|U|204
5DOX|1|1a|G|216
5DOX|1|1a|C|217
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: