HL_5E6M_004

3D structure

PDB id

5E6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of human wild type GlyRS bound with tRNAGly

Experimental method

X-RAY DIFFRACTION

Resolution

2.93 Å

Loop

Sequence

GUAGUGGUAUC

Length

11 nucleotides

Bulged bases

5E6M|1|E|G|18, 5E6M|1|E|G|19, 5E6M|1|E|U|20

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47284.1

Basepair signature

cWW-cWW-cWS-R-R

Number of instances in this motif group

5

Unit IDs

5E6M|1|E|G|12
5E6M|1|E|U|13
5E6M|1|E|A|14
5E6M|1|E|G|15
5E6M|1|E|U|16
5E6M|1|E|G|18
5E6M|1|E|G|19
5E6M|1|E|U|20
5E6M|1|E|A|21
5E6M|1|E|U|22
5E6M|1|E|C|23

Current chains

Chain E

tRNA(Gly)

Nearby chains

Chain A

Glycine--tRNA ligase

Chain B

Glycine--tRNA ligase