3D structure

PDB id
5E7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUGAAGAUGC
Length
10 nucleotides
Bulged bases
5E7K|1|14|A|2030, 5E7K|1|14|A|2031, 5E7K|1|14|G|2032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5E7K_081 not in the Motif Atlas
Homologous match to HL_7RQB_050
Geometric discrepancy: 0.0612
The information below is about HL_7RQB_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_90642.6
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
6

Unit IDs

5E7K|1|14|G|2027
5E7K|1|14|U|2028
5E7K|1|14|G|2029
5E7K|1|14|A|2030
5E7K|1|14|A|2031
5E7K|1|14|G|2032
5E7K|1|14|A|2033
5E7K|1|14|U|2034
5E7K|1|14|G|2035
5E7K|1|14|C|2036

Current chains

Chain 14
23S rRNA

Nearby chains

Chain 29
50S ribosomal protein L3

Coloring options:


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