3D structure

PDB id
5E7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UUUAGG
Length
6 nucleotides
Bulged bases
5E7K|1|1H|U|827, 5E7K|1|1H|G|830
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5E7K_157 not in the Motif Atlas
Homologous match to HL_7RQB_025
Geometric discrepancy: 0.1189
The information below is about HL_7RQB_025
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_53619.1
Basepair signature
cWW-F-F
Number of instances in this motif group
11

Unit IDs

5E7K|1|1H|U|826
5E7K|1|1H|U|827
5E7K|1|1H|U|828
5E7K|1|1H|A|829
5E7K|1|1H|G|830
5E7K|1|1H|G|831

Current chains

Chain 1H
23S rRNA

Nearby chains

Chain 78
50S ribosomal protein L15

Coloring options:


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