HL_5E81_095
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5E81_095 not in the Motif Atlas
- Homologous match to HL_5J7L_197
- Geometric discrepancy: 0.1004
- The information below is about HL_5J7L_197
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
5E81|1|14|C|2658
5E81|1|14|G|2659
5E81|1|14|A|2660
5E81|1|14|G|2661
5E81|1|14|A|2662
5E81|1|14|G|2663
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 59
- 50S ribosomal protein L6
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