HL_5E81_182
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 5E81|1|1H|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5E81_182 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1573
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5E81|1|1H|G|1910
5E81|1|1H|U|1911
5E81|1|1H|A|1912
5E81|1|1H|A|1913
5E81|1|1H|C|1914
5E81|1|1H|U|1915
5E81|1|1H|A|1916
5E81|1|1H|U|1917
5E81|1|1H|A|1918
5E81|1|1H|A|1919
5E81|1|1H|C|1920
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1K
- Transfer RNA; tRNA
- Chain 2K
- Transfer RNA; tRNA
- Chain 4K
- mRNA
Coloring options: