HL_5E81_236
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GG(5MU)(PSU)CAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.2
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
5E81|1|2K|G|53
5E81|1|2K|G|54
5E81|1|2K|5MU|55
5E81|1|2K|PSU|56
5E81|1|2K|C|57
5E81|1|2K|A|58
5E81|1|2K|A|59
5E81|1|2K|A|60
5E81|1|2K|U|61
5E81|1|2K|C|62
5E81|1|2K|C|63
Current chains
- Chain 2K
- tRNA-fMet
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 41
- 50S ribosomal protein L5
- Chain 88
- 50S ribosomal protein L16
- Chain I8
- 50S ribosomal protein L27
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