HL_5EL5_086
3D structure
- PDB id
- 5EL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 5EL5|1|14|A|2268, 5EL5|1|14|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL5_086 not in the Motif Atlas
- Homologous match to HL_7RQB_054
- Geometric discrepancy: 0.0784
- The information below is about HL_7RQB_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.6
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
5EL5|1|14|C|2264
5EL5|1|14|U|2265
5EL5|1|14|A|2266
5EL5|1|14|A|2267
5EL5|1|14|A|2268
5EL5|1|14|A|2269
5EL5|1|14|G|2270
5EL5|1|14|G|2271
5EL5|1|14|U|2272
5EL5|1|14|A|2273
5EL5|1|14|A|2274
5EL5|1|14|C|2275
5EL5|1|14|G|2276
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 45
- 50S ribosomal protein L16
- Chain E5
- 50S ribosomal protein L27
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