HL_5EL7_003
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGGGAAACUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL7_003 not in the Motif Atlas
- Geometric match to HL_3SKL_006
- Geometric discrepancy: 0.3424
- The information below is about HL_3SKL_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5EL7|1|13|G|156
5EL7|1|13|G|157
5EL7|1|13|G|158
5EL7|1|13|G|159
5EL7|1|13|A|160
5EL7|1|13|A|161
5EL7|1|13|A|162
5EL7|1|13|C|163
5EL7|1|13|U|164
5EL7|1|13|C|165
Current chains
- Chain 13
- 16S rRNA
Nearby chains
- Chain B8
- 50S ribosomal protein L19
- Chain BI
- 30S ribosomal protein S20
Coloring options: