#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_7OSM_1157OSM0.60945tRNA D-loopASIT tRNAC13A14G15A21G22ncWW
2 HL_3SKL_0063SKL0.00003BRNA (66-MER)A65A66C67U71U72cWWncWW
3 HL_2Y9H_0052Y9H0.24933JRNA (19-mer)A10C11G12G16U17cWWncWH
4 HL_5X6B_0015X6B0.39426P tRNAC12U13A14A21G22cWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAGUCGGUAG1
AACCUAUU1
ACGCGUGU1
CUAGGGGCUAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGUCGGUA1
ACCUAU1
CGCGUG1
UAGGGGCUA1

Release history

Release3.803.813.823.833.843.853.863.87
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-14
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • tRNA D-loop (1)
  • Basepair signature
    cWW-F-F-F
    Heat map statistics
    Min 0.25 | Avg 0.43 | Max 0.90
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