HL_5EL7_086
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGGACGGAAAUCC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL7_086 not in the Motif Atlas
- Geometric match to HL_6D12_002
- Geometric discrepancy: 0.2044
- The information below is about HL_6D12_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.6
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
5EL7|1|14|G|2302
5EL7|1|14|G|2303
5EL7|1|14|G|2304
5EL7|1|14|A|2305
5EL7|1|14|C|2306
5EL7|1|14|G|2307
5EL7|1|14|G|2308
5EL7|1|14|A|2309
5EL7|1|14|A|2310
5EL7|1|14|A|2311
5EL7|1|14|U|2312
5EL7|1|14|C|2313
5EL7|1|14|C|2314
Current chains
- Chain 14
- 23S rRNA
Nearby chains
- Chain 1J
- 5S ribosomal RNA; 5S rRNA
- Chain 49
- 50S ribosomal protein L5
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