HL_5EL7_118
3D structure
- PDB id
- 5EL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 5EL7|1|1G|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL7_118 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0996
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5EL7|1|1G|G|786
5EL7|1|1G|A|787
5EL7|1|1G|U|788
5EL7|1|1G|U|789
5EL7|1|1G|A|790
5EL7|1|1G|G|791
5EL7|1|1G|A|792
5EL7|1|1G|U|793
5EL7|1|1G|A|794
5EL7|1|1G|C|795
5EL7|1|1G|C|796
Current chains
- Chain 1G
- 16S rRNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 2L
- Transfer RNA; tRNA
- Chain 3L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
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