HL_5FCI_044

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGUAC

Length

5 nucleotides

Bulged bases

5FCI|1|1|G|1954, 5FCI|1|1|U|1955

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCI_044 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.1207

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

5FCI|1|1|G|1953
5FCI|1|1|G|1954
5FCI|1|1|U|1955
5FCI|1|1|A|2093
5FCI|1|1|C|2094

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain M9

60S ribosomal protein L19-A