HL_5FCI_158
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 5FCI|1|5|U|1925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCI_158 not in the Motif Atlas
- Homologous match to HL_8P9A_154
- Geometric discrepancy: 0.0991
- The information below is about HL_8P9A_154
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
5FCI|1|5|C|1923
5FCI|1|5|U|1924
5FCI|1|5|U|1925
5FCI|1|5|C|1926
5FCI|1|5|G|1927
5FCI|1|5|G|1928
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Small subunit ribosomal RNA; SSU rRNA
- Chain q1
- 60S ribosomal protein L41-A
- Chain q3
- 60S ribosomal protein L43-A
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