HL_5FCI_165
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 5FCI|1|5|U|2298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCI_165 not in the Motif Atlas
- Homologous match to HL_8P9A_161
- Geometric discrepancy: 0.0797
- The information below is about HL_8P9A_161
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
5FCI|1|5|U|2292
5FCI|1|5|C|2293
5FCI|1|5|U|2294
5FCI|1|5|A|2295
5FCI|1|5|A|2296
5FCI|1|5|U|2297
5FCI|1|5|U|2298
5FCI|1|5|A|2299
5FCI|1|5|G|2300
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Small subunit ribosomal RNA; SSU rRNA
- Chain n3
- 60S ribosomal protein L23-A
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