HL_5FCJ_109
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUCCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCJ_109 not in the Motif Atlas
- Homologous match to HL_8P9A_184
- Geometric discrepancy: 0.1193
- The information below is about HL_8P9A_184
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
5FCJ|1|3|C|36
5FCJ|1|3|G|37
5FCJ|1|3|U|38
5FCJ|1|3|C|39
5FCJ|1|3|C|40
5FCJ|1|3|G|41
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L5
- 60S ribosomal protein L5
- Chain M1
- 60S ribosomal protein L11-A
- Chain SM
- Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1,Suppressor protein STM1
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