HL_5FCJ_125

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_125 not in the Motif Atlas

Geometric match to HL_2C4Q_001

Geometric discrepancy: 0.2481

The information below is about HL_2C4Q_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

5FCJ|1|5|C|543
5FCJ|1|5|C|544
5FCJ|1|5|U|545
5FCJ|1|5|C|546
5FCJ|1|5|G|547
5FCJ|1|5|G|548

Current chains

Chain 5

25S ribosomal RNA

Nearby chains