HL_5FCJ_152

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CACCUUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_152 not in the Motif Atlas

Geometric match to HL_8C3A_006

Geometric discrepancy: 0.2104

The information below is about HL_8C3A_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5FCJ|1|5|C|1759
5FCJ|1|5|A|1760
5FCJ|1|5|C|1761
5FCJ|1|5|C|1762
5FCJ|1|5|U|1763
5FCJ|1|5|U|1764
5FCJ|1|5|U|1765
5FCJ|1|5|G|1766

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain m9

60S ribosomal protein L19-A

Chain n2

60S ribosomal protein L22-A

Chain n5

60S ribosomal protein L25