HL_5FL8_007
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UUGAAAAGA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FL8_007 not in the Motif Atlas
- Geometric match to HL_5T83_002
- Geometric discrepancy: 0.358
- The information below is about HL_5T83_002
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Guanidine riboswitch aptamer P2 hairpin
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
5FL8|1|x|U|381
5FL8|1|x|U|382
5FL8|1|x|G|383
5FL8|1|x|A|384
5FL8|1|x|A|385
5FL8|1|x|A|386
5FL8|1|x|A|387
5FL8|1|x|G|388
5FL8|1|x|A|389
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain P
- 60S ribosomal protein L17-A
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