HL_5FLX_008

3D structure

PDB id

5FLX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 40S HCV-IRES complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

5FLX|1|1|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FLX|1|1|G|377
5FLX|1|1|U|378
5FLX|1|1|C|379
5FLX|1|1|G|380
5FLX|1|1|C|381
5FLX|1|1|C|382
5FLX|1|1|G|383
5FLX|1|1|U|384
5FLX|1|1|G|385
5FLX|1|1|C|386
5FLX|1|1|C|387

Current chains

Chain 1

18S RRNA

Nearby chains

Chain I

40S RIBOSOMAL PROTEIN S8

Chain L

40S RIBOSOMAL PROTEIN S11