HL_5G2X_004
3D structure
- PDB id
- 5G2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure a of Group II Intron Complexed with its Reverse Transcriptase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUACCUAAAGACAAUCGGGUACGAC
- Length
- 26 nucleotides
- Bulged bases
- 5G2X|1|A|A|142, 5G2X|1|A|A|149, 5G2X|1|A|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25783.1
- Basepair signature
- cWW-cWW-L-R-R-cWW-R-R-R-R-R-R-R-R-R-R-R-R-R
- Number of instances in this motif group
- 1
Unit IDs
5G2X|1|A|G|128
5G2X|1|A|U|129
5G2X|1|A|U|130
5G2X|1|A|A|131
5G2X|1|A|C|132
5G2X|1|A|C|133
5G2X|1|A|U|134
5G2X|1|A|A|135
5G2X|1|A|A|136
5G2X|1|A|A|137
5G2X|1|A|G|138
5G2X|1|A|A|139
5G2X|1|A|C|140
5G2X|1|A|A|141
5G2X|1|A|A|142
5G2X|1|A|U|143
5G2X|1|A|C|144
5G2X|1|A|G|145
5G2X|1|A|G|146
5G2X|1|A|G|147
5G2X|1|A|U|148
5G2X|1|A|A|149
5G2X|1|A|C|150
5G2X|1|A|G|151
5G2X|1|A|A|152
5G2X|1|A|C|153
Current chains
- Chain A
- GROUP II INTRON
Nearby chains
- Chain C
- GROUP II INTRON-ENCODED PROTEIN LTRA
Coloring options: