HL_5G2X_017
3D structure
- PDB id
- 5G2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure a of Group II Intron Complexed with its Reverse Transcriptase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- ACCUAACCGAAAAGCGAAAGCUGAUACGGGAACAGAGCACGGU
- Length
- 43 nucleotides
- Bulged bases
- 5G2X|1|A|A|88, 5G2X|1|A|G|94, 5G2X|1|A|A|102, 5G2X|1|A|C|104, 5G2X|1|A|A|105, 5G2X|1|A|A|107, 5G2X|1|A|G|108, 5G2X|1|A|C|109, 5G2X|1|A|A|110
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5G2X|1|A|A|72
5G2X|1|A|C|73
5G2X|1|A|C|74
5G2X|1|A|U|75
5G2X|1|A|A|76
5G2X|1|A|A|77
5G2X|1|A|C|78
5G2X|1|A|C|79
5G2X|1|A|G|80
5G2X|1|A|A|81
5G2X|1|A|A|82
5G2X|1|A|A|83
5G2X|1|A|A|84
5G2X|1|A|G|85
5G2X|1|A|C|86
5G2X|1|A|G|87
5G2X|1|A|A|88
5G2X|1|A|A|89
5G2X|1|A|A|90
5G2X|1|A|G|91
5G2X|1|A|C|92
5G2X|1|A|U|93
5G2X|1|A|G|94
5G2X|1|A|A|95
5G2X|1|A|U|96
5G2X|1|A|A|97
5G2X|1|A|C|98
5G2X|1|A|G|99
5G2X|1|A|G|100
5G2X|1|A|G|101
5G2X|1|A|A|102
5G2X|1|A|A|103
5G2X|1|A|C|104
5G2X|1|A|A|105
5G2X|1|A|G|106
5G2X|1|A|A|107
5G2X|1|A|G|108
5G2X|1|A|C|109
5G2X|1|A|A|110
5G2X|1|A|C|111
5G2X|1|A|G|112
5G2X|1|A|G|113
5G2X|1|A|U|114
Current chains
- Chain A
- GROUP II INTRON
Nearby chains
- Chain B
- 5'-R(*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*CP)-3'
- Chain C
- GROUP II INTRON-ENCODED PROTEIN LTRA
Coloring options: