HL_5G2X_018
3D structure
- PDB id
- 5G2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure a of Group II Intron Complexed with its Reverse Transcriptase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAAGGUAAGUUAUGGUUGUGGACUUAUCUGUUAUCACCACAU
- Length
- 43 nucleotides
- Bulged bases
- 5G2X|1|A|A|265, 5G2X|1|A|U|277, 5G2X|1|A|G|278, 5G2X|1|A|U|293, 5G2X|1|A|A|300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5G2X|1|A|G|264
5G2X|1|A|A|265
5G2X|1|A|A|266
5G2X|1|A|A|267
5G2X|1|A|G|268
5G2X|1|A|G|269
5G2X|1|A|U|270
5G2X|1|A|A|271
5G2X|1|A|A|272
5G2X|1|A|G|273
5G2X|1|A|U|274
5G2X|1|A|U|275
5G2X|1|A|A|276
5G2X|1|A|U|277
5G2X|1|A|G|278
5G2X|1|A|G|279
5G2X|1|A|U|280
5G2X|1|A|U|281
5G2X|1|A|G|282
5G2X|1|A|U|283
5G2X|1|A|G|284
5G2X|1|A|G|285
5G2X|1|A|A|286
5G2X|1|A|C|287
5G2X|1|A|U|288
5G2X|1|A|U|289
5G2X|1|A|A|290
5G2X|1|A|U|291
5G2X|1|A|C|292
5G2X|1|A|U|293
5G2X|1|A|G|294
5G2X|1|A|U|295
5G2X|1|A|U|296
5G2X|1|A|A|297
5G2X|1|A|U|298
5G2X|1|A|C|299
5G2X|1|A|A|300
5G2X|1|A|C|301
5G2X|1|A|C|302
5G2X|1|A|A|303
5G2X|1|A|C|304
5G2X|1|A|A|305
5G2X|1|A|U|306
Current chains
- Chain A
- GROUP II INTRON
Nearby chains
- Chain B
- 5'-R(*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*CP)-3'
- Chain C
- GROUP II INTRON-ENCODED PROTEIN LTRA
Coloring options: