HL_5G2X_019
3D structure
- PDB id
- 5G2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure a of Group II Intron Complexed with its Reverse Transcriptase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AUUAAAAAUUGAUUAGGGAGGAAAACCUCAAACCAACAAUGGCAAU
- Length
- 46 nucleotides
- Bulged bases
- 5G2X|1|A|A|546, 5G2X|1|A|A|553, 5G2X|1|A|G|558, 5G2X|1|A|A|564
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5G2X|1|A|A|542
5G2X|1|A|U|543
5G2X|1|A|U|544
5G2X|1|A|A|545
5G2X|1|A|A|546
5G2X|1|A|A|547
5G2X|1|A|A|548
5G2X|1|A|A|549
5G2X|1|A|U|550
5G2X|1|A|U|551
5G2X|1|A|G|552
5G2X|1|A|A|553
5G2X|1|A|U|554
5G2X|1|A|U|555
5G2X|1|A|A|556
5G2X|1|A|G|557
5G2X|1|A|G|558
5G2X|1|A|G|559
5G2X|1|A|A|560
5G2X|1|A|G|561
5G2X|1|A|G|562
5G2X|1|A|A|563
5G2X|1|A|A|564
5G2X|1|A|A|565
5G2X|1|A|A|566
5G2X|1|A|C|567
5G2X|1|A|C|568
5G2X|1|A|U|569
5G2X|1|A|C|570
5G2X|1|A|A|571
5G2X|1|A|A|572
5G2X|1|A|A|579
5G2X|1|A|C|580
5G2X|1|A|C|581
5G2X|1|A|A|582
5G2X|1|A|A|583
5G2X|1|A|C|584
5G2X|1|A|A|585
5G2X|1|A|A|586
5G2X|1|A|U|587
5G2X|1|A|G|588
5G2X|1|A|G|589
5G2X|1|A|C|590
5G2X|1|A|A|591
5G2X|1|A|A|592
5G2X|1|A|U|593
Current chains
- Chain A
- GROUP II INTRON
Nearby chains
- Chain C
- GROUP II INTRON-ENCODED PROTEIN LTRA
Coloring options: