3D structure

PDB id
5G2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure a of Group II Intron Complexed with its Reverse Transcriptase
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UUGAUUAGGGAGGAAAACCUCAAACCAACAA
Length
31 nucleotides
Bulged bases
5G2X|1|A|A|553, 5G2X|1|A|G|558, 5G2X|1|A|A|564
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5G2X|1|A|U|550
5G2X|1|A|U|551
5G2X|1|A|G|552
5G2X|1|A|A|553
5G2X|1|A|U|554
5G2X|1|A|U|555
5G2X|1|A|A|556
5G2X|1|A|G|557
5G2X|1|A|G|558
5G2X|1|A|G|559
5G2X|1|A|A|560
5G2X|1|A|G|561
5G2X|1|A|G|562
5G2X|1|A|A|563
5G2X|1|A|A|564
5G2X|1|A|A|565
5G2X|1|A|A|566
5G2X|1|A|C|567
5G2X|1|A|C|568
5G2X|1|A|U|569
5G2X|1|A|C|570
5G2X|1|A|A|571
5G2X|1|A|A|572
5G2X|1|A|A|579
5G2X|1|A|C|580
5G2X|1|A|C|581
5G2X|1|A|A|582
5G2X|1|A|A|583
5G2X|1|A|C|584
5G2X|1|A|A|585
5G2X|1|A|A|586

Current chains

Chain A
GROUP II INTRON

Nearby chains

Chain C
GROUP II INTRON-ENCODED PROTEIN LTRA

Coloring options:

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