HL_5GAN_003

3D structure

PDB id

5GAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAAUCAAG

Length

8 nucleotides

Bulged bases

5GAN|1|V|C|128

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5GAN|1|V|C|101
5GAN|1|V|A|102
5GAN|1|V|A|103
5GAN|1|V|U|104
5GAN|1|V|C|128
5GAN|1|V|A|129
5GAN|1|V|A|130
5GAN|1|V|G|131

Current chains

Chain V

U4 snRNA

Nearby chains

Chain B

Pre-mRNA-splicing helicase BRR2

Chain n

Small nuclear ribonucleoprotein Sm D3