5GAN Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5GAN_001 | 1/U/91:103 | No text annotation | ||
| HL_5GAN_002 | 1/V/36:41 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5GAN_003 | No text annotation | ||
| HL_5GAN_004 | No text annotation | ||
| HL_5GAN_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5GAN_002 | 1/U/12:20, 1/U/132:136 | No text annotation | ||
| IL_5GAN_012 | 1/U/20:28, 1/U/125:132 | No text annotation | ||
| IL_5GAN_003 | 1/U/32:34, 1/U/120:121 | No text annotation | ||
| IL_5GAN_004 | 1/U/43:46, 1/U/69:72 | No text annotation | ||
| IL_5GAN_005 | 1/U/80:84, 1/U/110:112 | No text annotation | ||
| IL_5GAN_006 | 1/V/11:13, 1/W/68:70 | No text annotation | homologous IL_5VSU_002 NA | |
| IL_5GAN_007 | 1/V/24:26, 1/V/48:49 | No text annotation | ||
| IL_5GAN_008 | 1/V/28:34, 1/V/43:46 | No text annotation | ||
| IL_5GAN_014 | 1/V/94:96, 1/V/136:139 | No text annotation | ||
| IL_5GAN_011 | 1/W/33:35, 1/W/46:50 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5GAN_001 | No text annotation | ||
| IL_5GAN_013 | No text annotation | ||
| IL_5GAN_009 | No text annotation | ||
| IL_5GAN_010 | Isolated cWH basepair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5GAN_002 | 1/U/40:41, 1/U/74:80, 1/U/112:114 | No text annotation | ||
| J3_5GAN_001 | 1/V/17:20, 1/V/53:57, 1/W/62:64 | No text annotation |
Problematic loops
No problematic loops
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