HL_5H5U_051
3D structure
- PDB id
- 5H5U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanistic insights into the alternative translation termination by ArfA and RF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GUAACCAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 5H5U|1|A|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5H5U_051 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1104
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5H5U|1|A|G|1910
5H5U|1|A|U|1911
5H5U|1|A|A|1912
5H5U|1|A|A|1913
5H5U|1|A|C|1914
5H5U|1|A|C|1915
5H5U|1|A|A|1916
5H5U|1|A|U|1917
5H5U|1|A|A|1918
5H5U|1|A|A|1919
5H5U|1|A|C|1920
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Alternative ribosome-rescue factor A
- Chain 4
- Peptide chain release factor 2
- Chain 5
- Transfer RNA; tRNA
- Chain h
- Small subunit ribosomal RNA; SSU rRNA
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