HL_5HCR_071
3D structure
- PDB id
- 5HCR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GACAACCCGGGGAAACUCGGGCUAAUC
- Length
- 27 nucleotides
- Bulged bases
- 5HCR|1|1a|U|168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5HCR|1|1a|G|143
5HCR|1|1a|A|144
5HCR|1|1a|C|145
5HCR|1|1a|A|146
5HCR|1|1a|A|147
5HCR|1|1a|C|148
5HCR|1|1a|C|149
5HCR|1|1a|C|150
5HCR|1|1a|G|151
5HCR|1|1a|G|152
5HCR|1|1a|G|153
5HCR|1|1a|G|154
5HCR|1|1a|A|155
5HCR|1|1a|A|156
5HCR|1|1a|A|157
5HCR|1|1a|C|158
5HCR|1|1a|U|159
5HCR|1|1a|C|160
5HCR|1|1a|G|161
5HCR|1|1a|G|162
5HCR|1|1a|G|163
5HCR|1|1a|C|164
5HCR|1|1a|U|165
5HCR|1|1a|A|166
5HCR|1|1a|A|167
5HCR|1|1a|U|168
5HCR|1|1a|C|169
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1T
- 50S ribosomal protein L19
- Chain 1t
- 30S ribosomal protein S20
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