HL_5I4L_158
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUAC
- Length
- 5 nucleotides
- Bulged bases
- 5I4L|1|5|G|2111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5I4L_158 not in the Motif Atlas
- Homologous match to HL_5TBW_045
- Geometric discrepancy: 0.0894
- The information below is about HL_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55195.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 6
Unit IDs
5I4L|1|5|G|2110
5I4L|1|5|G|2111
5I4L|1|5|U|2112
5I4L|1|5|A|2113
5I4L|1|5|C|2114
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m9
- 60S ribosomal protein L19-A
- Chain n4
- 60S ribosomal protein L24-A
Coloring options: