Motif HL_55195.2 Version HL_55195.2 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7A0S_024 | 7A0S | 0.1879 | 3 | X | LSU rRNA | U | 839 | A | 842 | G | 844 | cWW |
| 2 | HL_4V9F_026 | 4V9F | 0.2107 | 3 | 0 | LSU rRNA | U | 919 | A | 922 | G | 924 | cWW |
| 3 | HL_4WF9_025 | 4WF9 | 0.0750 | 3 | X | LSU rRNA | U | 871 | A | 874 | G | 876 | cWW |
| 4 | HL_5J7L_157 | 5J7L | 0.0638 | 3 | DA | LSU rRNA | U | 826 | A | 829 | G | 831 | cWW |
| 5 | HL_8VTW_024 | 8VTW | 0.0000 | 3 | 1A | LSU rRNA | U | 826 | A | 829 | G | 831 | cWW |
| 6 | HL_5TBW_045 | 5TBW | 0.8106 | 2 | 1 | LSU rRNA | G | 2110 | A | 2113 | C | 2114 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUAGG | 3 |
| UUGAGG | 1 |
| UCGAAG | 1 |
| GGUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAG | 3 |
| UGAG | 1 |
| CGAA | 1 |
| GUA | 1 |
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