HL_5IMR_024
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GUCUC
- Length
- 5 nucleotides
- Bulged bases
- 5IMR|1|A|U|841, 5IMR|1|A|U|843
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IMR_024 not in the Motif Atlas
- Homologous match to HL_6CZR_089
- Geometric discrepancy: 0.4273
- The information below is about HL_6CZR_089
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 51
Unit IDs
5IMR|1|A|G|838
5IMR|1|A|U|841
5IMR|1|A|C|842
5IMR|1|A|U|843
5IMR|1|A|C|848
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S2
Coloring options: