HL_5IMR_056

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CUUAAGCCGUUGAGGCGGAGG

Length

21 nucleotides

Bulged bases

5IMR|1|D|U|613, 5IMR|1|D|U|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|C|605
5IMR|1|D|U|606
5IMR|1|D|U|607
5IMR|1|D|A|608
5IMR|1|D|A|609
5IMR|1|D|G|609|||A
5IMR|1|D|C|610
5IMR|1|D|C|611
5IMR|1|D|G|612
5IMR|1|D|U|613
5IMR|1|D|U|614
5IMR|1|D|G|615
5IMR|1|D|A|616
5IMR|1|D|G|617
5IMR|1|D|G|618
5IMR|1|D|C|618|||A
5IMR|1|D|G|619
5IMR|1|D|G|620
5IMR|1|D|A|621
5IMR|1|D|G|622
5IMR|1|D|G|623

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L4

Chain h

50S ribosomal protein L15