3D structure

PDB id
5IMR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosome bound to cofactor at 5.7 angstrom resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
5.7 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
5IMR|1|D|A|1096
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5IMR|1|D|C|1092
5IMR|1|D|G|1093
5IMR|1|D|U|1094
5IMR|1|D|A|1095
5IMR|1|D|A|1096
5IMR|1|D|U|1097
5IMR|1|D|A|1098
5IMR|1|D|G|1099

Current chains

Chain D
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L11
Chain C
Elongation factor 4
Chain e
50S ribosomal protein L6

Coloring options:

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