HL_5IMR_085

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CCCCGCCUCCGGGUGGGG

Length

18 nucleotides

Bulged bases

5IMR|1|D|G|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|C|2137
5IMR|1|D|C|2138
5IMR|1|D|C|2139
5IMR|1|D|C|2140
5IMR|1|D|G|2141
5IMR|1|D|C|2142
5IMR|1|D|C|2143
5IMR|1|D|U|2144
5IMR|1|D|C|2145
5IMR|1|D|C|2146
5IMR|1|D|G|2147
5IMR|1|D|G|2148
5IMR|1|D|G|2149
5IMR|1|D|U|2150
5IMR|1|D|G|2151
5IMR|1|D|G|2152
5IMR|1|D|G|2153
5IMR|1|D|G|2154

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain Z

50S ribosomal protein L1