HL_5IMR_101
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GAAGACCAC
- Length
- 9 nucleotides
- Bulged bases
- 5IMR|1|D|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IMR_101 not in the Motif Atlas
- Homologous match to HL_7A0S_067
- Geometric discrepancy: 0.2176
- The information below is about HL_7A0S_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
5IMR|1|D|G|2819
5IMR|1|D|A|2820
5IMR|1|D|A|2821
5IMR|1|D|G|2822
5IMR|1|D|A|2823
5IMR|1|D|C|2824
5IMR|1|D|C|2825
5IMR|1|D|A|2826
5IMR|1|D|C|2827
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L17
- Chain l
- 50S ribosomal protein L19
- Chain w
- 50S ribosomal protein L32
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