HL_5IMR_123

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

UCCUAGUACGAGAGGACCGGA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|D|U|2650
5IMR|1|D|C|2651
5IMR|1|D|C|2652
5IMR|1|D|U|2653
5IMR|1|D|A|2654
5IMR|1|D|G|2655
5IMR|1|D|U|2656
5IMR|1|D|A|2657
5IMR|1|D|C|2658
5IMR|1|D|G|2659
5IMR|1|D|A|2660
5IMR|1|D|G|2661
5IMR|1|D|A|2662
5IMR|1|D|G|2663
5IMR|1|D|G|2664
5IMR|1|D|A|2665
5IMR|1|D|C|2666
5IMR|1|D|C|2667
5IMR|1|D|G|2668
5IMR|1|D|G|2669
5IMR|1|D|A|2670

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain C

Elongation factor 4

Chain b

50S ribosomal protein L3

Chain e

50S ribosomal protein L6

Chain g

50S ribosomal protein L14