HL_5IQR_028
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 5IQR|1|1|A|1070
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_028 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.2874
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5IQR|1|1|C|1064
5IQR|1|1|U|1065
5IQR|1|1|U|1066
5IQR|1|1|A|1067
5IQR|1|1|G|1068
5IQR|1|1|A|1069
5IQR|1|1|A|1070
5IQR|1|1|G|1071
5IQR|1|1|C|1072
5IQR|1|1|A|1073
5IQR|1|1|G|1074
Current chains
- Chain 1
- LSU rRNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain 8
- GTP pyrophosphokinase
- Chain I
- 50S ribosomal protein L11
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