HL_5IQR_030
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GACGCUUAUGCGUU
- Length
- 14 nucleotides
- Bulged bases
- 5IQR|1|1|U|1174, 5IQR|1|1|A|1175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_030 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3073
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
5IQR|1|1|G|1168
5IQR|1|1|A|1169
5IQR|1|1|C|1170
5IQR|1|1|G|1171
5IQR|1|1|C|1172
5IQR|1|1|U|1173
5IQR|1|1|U|1174
5IQR|1|1|A|1175
5IQR|1|1|U|1176
5IQR|1|1|G|1177
5IQR|1|1|C|1178
5IQR|1|1|G|1179
5IQR|1|1|U|1180
5IQR|1|1|U|1181
Current chains
- Chain 1
- LSU rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain R
- 50S ribosomal protein L21
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