HL_5IQR_110
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- A(PSU)UGAA(6IA)AU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, 6IA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_110 not in the Motif Atlas
- Homologous match to HL_4V9I_039
- Geometric discrepancy: 0.2742
- The information below is about HL_4V9I_039
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
5IQR|1|6|A|31
5IQR|1|6|PSU|32
5IQR|1|6|U|33
5IQR|1|6|G|34
5IQR|1|6|A|35
5IQR|1|6|A|36
5IQR|1|6|6IA|37
5IQR|1|6|A|38
5IQR|1|6|U|39
Current chains
- Chain 6
- A/T tRNA(Phe)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 7
- mRNA
- Chain q
- 30S ribosomal protein S12
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