HL_5IQR_120
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUCAGUCGGUAGAG
- Length
- 14 nucleotides
- Bulged bases
- 5IQR|1|4|C|17, 5IQR|1|4|G|18, 5IQR|1|4|G|19
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_120 not in the Motif Atlas
- Homologous match to HL_4V9I_038
- Geometric discrepancy: 0.4411
- The information below is about HL_4V9I_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5IQR|1|4|C|11
5IQR|1|4|U|12
5IQR|1|4|C|13
5IQR|1|4|A|14
5IQR|1|4|G|15
5IQR|1|4|U|16
5IQR|1|4|C|17
5IQR|1|4|G|18
5IQR|1|4|G|19
5IQR|1|4|U|20
5IQR|1|4|A|21
5IQR|1|4|G|22
5IQR|1|4|A|23
5IQR|1|4|G|24
Current chains
- Chain 4
- E-site tRNA(Phe)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
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